There are about 8 million deaths each year from neglected tropical diseases (NTDs) in the underdeveloped world, whilst drug discovery focus and practice is only recently taking on greater urgency and embracing the latest technologies. This unique book is a state of the art review of drug discovery in respect of NTDs and highlights best practice to guide the ongoing drug discovery effort and also to raise debate and awareness in areas that remain highly neglected. All the major diseases such as malaria, trypanosomatids and TB are covered, with a review of each disease and established compounds, new mechanistic classes and new horizons. Each chapter highlights the key science that has led to breakthroughs, with detailed assessment of the key medicinal chemistry involved, and critical appraisal of new emerging approaches. Later chapters highlight under publicized disease areas where the medical needs are neglected and research is very limited, to raise awareness. The editors, acknowledged experts in the field, have a wealth of experience in successful drug discovery practice and tropical diseases.
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Michael J Palmer is a Senior Principal Scientist at Pfizer. He has worldwide medicinal chemistry and drug discovery based experience across many different therapeutic areas. He is a member of the drug discovery teams responsible for carduraTM, additional cardiovascular agents that progressed to man, and cardiovascular and antiviral agents in Phase I and II stages of development. Timothy NC Wells is Chief Scientific Officer at Medicines for Malaria Venture, Geneva, Switzerland.
There are ~8 million deaths every year from neglected tropical diseases (NTDs) in the underdeveloped world, whilst drug discovery focus and practice is only recently taking on greater urgency and embracing the latest technologies. The aim of this book is to present a state-of-the-art review of drug discovery in respect of NTDs and to highlight best practice to guide ongoing drug discovery effort, to raise awareness and promote debate in neglected disease areas that still have unmet medical need. Neglected Diseases and Drug Discovery, details nearly all of the key diseases that fall into this class. It sets out to make a critical appraisal of ongoing research with a focus on the key science that has led to breakthroughs, especially from a medicinal chemistry perspective. The book covers in great depth current efforts in the malaria, trypanosomatid, flavivirus and tuberculosis fields, wherein an upsurge in research efforts has been evident in recent times. Additionally, there is some focus on the 'neglected' neglected diseases, notably diarrhea, helminths, HIV (in worldwide terms) and lower respiratory tract infections. In respect of the more publicised disease areas such as malaria there is a review of each disease and established compounds, mechanistic classes and new horizons. In the more under-publicised areas the chapters seek to highlight the pressing need for better and more widely available treatments Written by a team of experienced experts the book will prove to be an invaluable guide to successful practice in NTDs highlighting ongoing and new drug discovery efforts in this field. It will aid both researchers and the general reader, by summarising the key learning to date and provide a clear overview of the challenges that remain.
Chapter 1 Malaria: New Medicines for its Control and Eradication Timothy N. C. Wells and Winston E. Gutteridge, 1,
Chapter 2 Semisynthetic Artemisinin and Synthetic Peroxide Antimalarials Leann Tilley, Susan A. Charman and Jonathan L. Vennerstrom, 33,
Chapter 3 Antimalarial Agents Targeting Nucleotide Synthesis and Electron Transport: Insight from Structural Biology Margaret A. Phillips, 65,
Chapter 4 Human Targets Repositioning and Cell-based Approaches for Antimalarial Discovery Arnab K. Chatterjee and Elizabeth A. Winzeler, 88,
Chapter 5 The Medicinal Chemistry of Eradication: Hitting the Lifecycle where it Hurts. Approaches to Blocking Transmission Jeremy Nicholas Burrows and Robert Edward Sinden, 112,
Chapter 6 Drugs for Kinetoplastid Diseases – Current Situation and Challenges Simon L. Croft, 134,
Chapter 7 Drug Discovery for Kinetoplastid Diseases Robert T. Jacobs, 159,
Chapter 8 The Challenges of Flavivirus Drug Discovery Pei-Yong Shi, Qing-Yin Wang and Thomas H. Keller, 203,
Chapter 9 Current Approaches to Tuberculosis Drug Discovery and Development Mark J. Mitton-Fry and Debra Hanna, 228,
Chapter 10 Diarrhoeal Diseases David Brown, 262,
Chapter 11 Anthelmintic Discovery for Human Infections Timothy G. Geary and Noelle Gauvry, 290,
Chapter 12 Managing the HIV Epidemic in the Developing World – Progress and Challenges Elna van der Ryst, Michael J Palmer and Cloete van Vuuren, 322,
Chapter 13 Drug Discovery for Lower Respiratory Tract Infections J Carl Craft, 366,
Subject Index, 412,
Malaria: New Medicines for its Control and Eradication
1.1 Introduction
Malaria is caused by protozoan parasites of the genus Plasmodium that infect and destroy red blood cells, leading to fever, severe anaemia and, if untreated, cerebral malaria and death. Plasmodium falciparum is the dominant species in sub-Saharan Africa, and is responsible for almost one million deaths each year. The disease burden is heaviest in sub-Saharan African children under 3 years old (who have frequent attacks and little immunological protection), and also in expectant mothers. Malaria is both a cause and a consequence of poverty: in countries with intense malaria transmission, the economic impact of the disease results in a slowing of economic growth of 1.3% per year, translating to a reduction of the Gross Domestic Product in sub-Saharan Africa estimated to be US$12 billion per year.
The global fight to control malaria requires a multifaceted approach. At present, we have a wide range of effective tools. Medicines can be used to prevent as well as to cure, especially in vulnerable populations such as infants or pregnant women. Insecticides and larvicide spraying and the use of insecticide-impregnated bed nets to protect against infection by mosquitoes have dramatically increased in recent years. This success brings with it the need for the development of the next generation of insecticides, since resistance to the current gold standard, the pyrethroids, is already an issue. Developing a vaccine is proving especially challenging, as the parasite has sophisticated mechanisms for avoiding the host immune system. The best candidate currently is GSK 257049, known as RTS,S/AS202, where phase III trials are expected to finish in July 2013. Phase II studies suggest that it will reduce risk of clinical malaria, and decrease mortality in severe malaria by 50%.
In November 2007, the Bill and Melinda Gates Foundation set an agenda with the final goal of completely eradicating malaria, an objective supported by both the World Health Organization (WHO) and its Roll Back Malaria (RBM) partnership. Commentators have described this objective as 'worthy, challenging, and just possible', but one which must be pursued with balance, humility, and rigorous analysis.
The addition of this new goal has implications for the global malaria R&D agenda, which have been discussed in a variety of different working groups. Future antimalarial medicines must not only be able to treat the asexual blood stages of P. falciparum, but also to block the transmission of the parasite to other persons via the mosquito vector and, in the case of P. vivax infection, to target the dormant liver-stage of the parasite. In this chapter, we discuss the current pipeline of antimalarial medicines, and the target product profiles for the generation of such products.
1.2 The Challenges of the Different Plasmodium Species
Four main species of the malaria parasite infect humans. P. falciparum is responsible for the vast majority of the malaria-linked deaths in sub-Saharan Africa and is therefore the most important target. P. vivax constitutes as much as 25–40% of the global malaria burden, particularly in South and Southeast Asia, and Central and South America. It does not normally progress to cerebral malaria, and has been traditionally labelled benign. However, P. vivax causes a greater host inflammatory response than P. falciparum at equivalent parasitaemia. Mortality from P. vivax is most likely underreported, as recent analyses in Papua (Indonesia), have shown similar mortality figures in children to those found with P. falciparum.
Medicines that are active on the asexual erythrocyte stages of P. falciparum, such as the artemisinin-based combination therapies (ACTs), are assumed to be fully active against the other species. The formal clinical database supporting this assumption is relatively thin but is well supported by empirical observation. Historically, mixed infections of P. falciparum and P. vivax are rarely reported, possibly because P. falciparum suppresses the development of P. vivax, but PCR detection methods have shown that these can be as high as 30%.14 The other two species are P. malariae and P. ovale. Currently, these are diagnosed by microscopy, and represent a small percentage of infections. Diagnosis based on Polymerase Chain Reaction (PCR) will undoubtedly lead to a re-evaluation of the presence of mixed infections, since it is able to quantify low parasite numbers, and is often more definitive as a diagnostic.
From a treatment and eradication perspective, there are 3 key differences between the species. The first difference occurs in the liver. Following infection of the patient, parasites rapidly progress to infect hepatocytes, undergo asexual schizogony, and release large numbers of merozoites into the host bloodstream. In P. vivax and P. ovale, some of the liver parasites become dormant (a form known as the hypnozoite). These forms can be reactivated after periods that vary from 3 weeks to several years, dependent on the strain of parasite and the status of the host. Unless the hypnozoites are eliminated, malaria will continue to relapse periodically. Since P. vivax transmission is rarely intense, activation of hypnozoites is thought to be a major contributor to disease frequency.
The second difference between the species is in the time taken for the parasite to replicate in the host. The time between febrile paroxysms varies from around 48 hours for P. falciparum and P. vivax to 72 hours for the more benign P. malariae. There has been a recent interest...
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