Methods of Microarray Data Analysis III: Papers from CAMDA '02 - Softcover

Inhaltsangabe

Contributing Authors. Preface. Introduction. Section I: Tutorials. The Biology Behind Gene Expression: A Basic Tutorial; M.F. Ochs, E.A. Golemis. Monitoring the Quality of Microarray Experiments; K.R. Coombes, Jing Wang, L.V. Abruzzo. Outliers in Microarray Data Analysis; R.K. Pearson, G.E. Gonye, J.S. Schwaber. Section II: Best Presentation Award. Organ-Specific Differences in Gene Expression and Unigene Annotations Describing Source Material; D.N. Stivers, Jing Wang, G.L. Rosner, K.R. Coombes. Section III: Analyzing Images. Characterization, Modeling, and Simulation of Mouse Microarray Data; D.S. Lalush. Topological Adjustments to Genechip Expression Values; A. Ptitsyn. Section IV: Normalizing Raw Data. Comparison of Normalization Methods for CDNA Microarrays; L. Warren, B. Liu. Section V: Characterizing Technical and Biological Variance. Simultaneous Assessment of Transcriptomic Variability and Tissue Effects in the Normal Mouse; Shibing Deng, Tzu-Ming Chu, R. Wolfinger. How Many Mice and How Many Arrays? Replication in Mouse CDNA Microarray Experiments; Xiangqin Cui, G.A. Churchill. Bayesian Characterization of Natural Variation in Gene Expression; M. Bhattacharjee, C. Pritchard, M.J. Sillanpää, E. Arjas. Section VI: Investigating Cross Hybridization On Oligonucleotide Microarrays. Quantification of Cross Hybridization on Oligonucleotide Microarrays; Li Zhang, K.R. Coombes, Lianchun Xiao. Assessing The Potential Effect Of Cross-Hybridization On Oligonucleotide Microarrays; S. Kachalo, Z. Arbieva, Jie Liang. Who Are Those Strangers in the Latin Square? Wen-Ping Hsieh, Tzu-Ming Chu, R. Wolfinger. Section VII: FindingPatterns and Seeking Biological Explanations. Bayesian Decomposition Classification of the Project Normal Data Set; T.D. Moloshok, D. Datta, A.V. Kossenkov, M.F. Ochs. The Use of Go Terms to Understand the Biological Significance of Microarray Differential Gene Expression Data; R. Díaz-Uriarte, F. Al-Shahrour, J. Dopazo. Acknowledgments. Index.

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