Biomedical Informatics for Cancer Research - Softcover

Inhaltsangabe

Section 1: Concepts, Issues, and Approaches 1. Biomedical Informatics for Cancer Research: Introduction Michael F. Ochs, John T. Casagrande, Ramana V. Davuluri 2. Clinical Research Systems and Integration with Medical Systems Joyce C. Niland, Layla Rouse 3. Data Management, Databases and Warehousing Waqas Amin, Hyunseok Peter Kang, Michael J. Becich 4. Middleware Architecture Approaches for Collaborative Cancer Research Tahsin Kurc, Ashish Sharma, Scott Oster, Tony Pan, Shannon Hastings, Stephen Langella, David Ervin, Justin Permar, Daniel Brat, TJ Fitzgerald ,James Purdy, Walter Bosch, Joel Saltz 5. Federated Authentication Frank J. Manion,, William Weems, and William McNamee 6. Genomics Data Analysis Pipelines Michael F. Ochs 7. Mathematical Modeling in Cancer Robert A. Gatenby 8. Reproducible Research Concepts and Tools for Cancer Bioinformatics Vincent J Carey, Victoria Stodden 9. The Cancer Biomedical Informatics Grid (caBIG®): An Evolving Community for Cancer Research J. Robert Beck Section 2: Tools and Applications 10. The caBIG® Clinical Trials Suite John Speakman 11. The CAISIS Research Data System Paul Fearn, Frank Sculli 12. A Common Application Framework that is Extensible: CAF--É Richard Evans, Mark DeTomaso, Reed Comire, Vaibhav Bora, Jeet Poonater, Aarti Vaishnav, Scott Catherall, John T. Casagrande 13. Shared Resource Management (SRM) Matt Stine, Vicki Beal, Nilesh Dosooye, Yingliang Du, Rama Gundapaneni, Andrew Pappas, Srinivas Raghavan, Sundeep Shakya, Roshan Shrestha, Momodou Sanyang, Clayton Naeve 14. The caBIG® Life Science Distribution Juli Klemm, Anand Basu, Ian Fore, Aris Floratos, George Komatsoulis 15. MeV: MultiExperiment Viewer Eleanor Howe, Kristina Holton, Sarita Nair, Daniel Schlauch,Raktim Sinha and John Quackenbush 16. Authentication and Authorization in Cancer Research Systems Stephen Langella, Shannon Hastings, Scott Oster, Philip Payne, Frank Siebenlist 17. Caching and Visualizing Statistical Analyses Roger D. Peng, Duncan Temple Lang 18. Familial Cancer Risk Assessment Using BayesMendel Amanda Blackford, Giovanni Parmigiani 19. Interpreting and Comparing Clustering Experiments through Graph Visualization and Ontology Statistical Enrichment with the ClutrFree Package Ghislain Bidaut 20. Enhanced Dynamic Documents for Reproducible Research Deborah Nolan, Roger D. Peng, Duncan Temple Lang.

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